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bioconda / packages / bioconductor-nempi 1.10.0

Inferring unobserved perturbations from gene expression data

Installers

  • noarch v1.10.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-nempi

Description

Takes as input an incomplete perturbation profile and differential gene expression in log odds and infers unobserved perturbations and augments observed ones. The inference is done by iteratively inferring a network from the perturbations and inferring perturbations from the network. The network inference is done by Nested Effects Models.


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