bioconda / packages / bioconductor-nanostringqcpro 1.26.0

Quality metrics and data processing methods for NanoString mRNA gene expression data

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.26.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-nanostringqcpro
conda install -c bioconda/label/gcc7 bioconductor-nanostringqcpro

Description

NanoStringQCPro provides a set of quality metrics that can be used to assess the quality of NanoString mRNA gene expression data -- i.e. to identify outlier probes and outlier samples. It also provides different background subtraction and normalization approaches for this data. It outputs suggestions for flagging samples/probes and an easily sharable html quality control output.


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