bioconda / packages / bioconductor-mosaicsexample 1.35.0

Example data for the mosaics package, which implements MOSAiCS and MOSAiCS-HMM, a statistical framework to analyze one-sample or two-sample ChIP-seq data for transcription factor binding and histone modification

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.35.0

conda install

To install this package run one of the following:
conda install -c bioconda bioconductor-mosaicsexample
conda install -c "bioconda/label/gcc7" bioconductor-mosaicsexample

Description

Data for the mosaics package, consisting of (1) chromosome 22 ChIP and control sample data from a ChIP-seq experiment of STAT1 binding and H3K4me3 modification in MCF7 cell line from ENCODE database (HG19) and (2) chromosome 21 ChIP and control sample data from a ChIP-seq experiment of STAT1 binding, with mappability, GC content, and sequence ambiguity scores of human genome HG18.


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