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bioconda / packages / bioconductor-mitoode 1.25.0

Implementation of the differential equation model described in "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay"

Installers

Info: This package contains files in non-standard labels.
  • osx-64 v1.25.0
  • linux-64 v1.25.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-mitoode
conda install bioconda/label/gcc7::bioconductor-mitoode

Description

The package contains the methods to fit a cell-cycle model on cell count data and the code to reproduce the results shown in our paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" by Pau, G., Walter, T., Neumann, B., Heriche, J.-K., Ellenberg, J., & Huber, W., BMC Bioinformatics (2013), 14(1), 308. doi:10.1186/1471-2105-14-308


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