bioconductor-matrixrider
Obtain total affinity and occupancies for binding site matrices on a given sequence
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Description
Calculates a single number for a whole sequence that reflects the propensity of a DNA binding protein to interact with it. The DNA binding protein has to be described with a PFM matrix, for example gotten from Jaspar.
About
Summary
Obtain total affinity and occupancies for binding site matrices on a given sequence
Last Updated
Mar 1, 2026 at 21:59
License
GPL-3
Supported Platforms
linux-64
macOS-64