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bioconductor-magar

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MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-magar

Usage Tracking

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Description

"Methylation-Aware Genotype Association in R" (MAGAR) computes methQTL from DNA methylation and genotyping data from matched samples. MAGAR uses a linear modeling stragety to call CpGs/SNPs that are methQTLs. MAGAR accounts for the local correlation structure of CpGs.

About

Summary

MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data

Last Updated

Jan 2, 2025 at 02:31

License

GPL-3

Total Downloads

10.1K

Supported Platforms

noarch