bioconda / packages / bioconductor-macat 1.68.0

MicroArray Chromosome Analysis Tool

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.54.0
  • noarch  v1.68.0
  • osx-64  v1.54.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-macat
conda install -c bioconda/label/gcc7 bioconductor-macat
conda install -c bioconda/label/cf201901 bioconductor-macat

Description

This library contains functions to investigate links between differential gene expression and the chromosomal localization of the genes. MACAT is motivated by the common observation of phenomena involving large chromosomal regions in tumor cells. MACAT is the implementation of a statistical approach for identifying significantly differentially expressed chromosome regions. The functions have been tested on a publicly available data set about acute lymphoblastic leukemia (Yeoh et al.Cancer Cell 2002), which is provided in the library 'stjudem'.


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