bioconda / packages / bioconductor-inpas 1.20.0

InPAS: a bioconductor package for the identification of novel alternative PolyAdenylation Sites (PAS) using RNA-seq data

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.20.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-inpas
conda install -c bioconda/label/gcc7 bioconductor-inpas

Description

Alternative polyadenylation (APA) is one of the important post-transcriptional regulation mechanisms which occurs in most human genes. InPAS facilitates the discovery of novel APA sites and the differential usage of APA sites from RNA-Seq data. It leverages cleanUpdTSeq to fine tune identified APA sites by removing false sites due to internal-priming.

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