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bioconductor-harmandata

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Data for the Harman package

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-harmandata

Usage Tracking

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Description

Datasets of accompany Harman, a PCA and constrained optimisation based technique. Contains three example datasets: IMR90, Human lung fibroblast cells exposed to nitric oxide; NPM, an experiment to test skin penetration of metal oxide nanoparticles following topical application of sunscreens in non-pregnant mice; OLF; an experiment to gauge the response of human olfactory neurosphere-derived (hONS) cells to ZnO nanoparticles. Since version 1.24, this package also contains the Infinium5 dataset, a set of batch correction adjustments across 5 Illumina Infinium Methylation BeadChip datasets. This file does not contain methylation data, but summary statistics of 5 datasets after correction. There is also an EpiSCOPE_sample file as exampling for the new methylation clustering functionality in Harman.

About

Summary

Data for the Harman package

Last Updated

Dec 17, 2024 at 05:02

License

GPL-3

Total Downloads

27.2K

Supported Platforms

noarch