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bioconda / packages / bioconductor-harman 1.30.0

The removal of batch effects from datasets using a PCA and constrained optimisation based technique

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.30.0
  • osx-64 v1.30.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-harman
conda install bioconda/label/cf201901::bioconductor-harman
conda install bioconda/label/gcc7::bioconductor-harman

Description

Harman is a PCA and constrained optimisation based technique that maximises the removal of batch effects from datasets, with the constraint that the probability of overcorrection (i.e. removing genuine biological signal along with batch noise) is kept to a fraction which is set by the end-user.


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