bioconda / packages / bioconductor-girafe 1.44.0

Genome Intervals and Read Alignments for Functional Exploration

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.44.0
  • osx-64  v1.44.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-girafe
conda install -c bioconda/label/gcc7 bioconductor-girafe
conda install -c bioconda/label/cf201901 bioconductor-girafe

Description

The package 'girafe' deals with the genome-level representation of aligned reads from next-generation sequencing data. It contains an object class for enabling a detailed description of genome intervals with aligned reads and functions for comparing, visualising, exporting and working with such intervals and the aligned reads. As such, the package interacts with and provides a link between the packages ShortRead, IRanges and genomeIntervals.


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