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bioconductor-genomicinteractionnodes

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A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-genomicinteractionnodes

Usage Tracking

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Description

The GenomicInteractionNodes package can import interactions from bedpe file and define the interaction nodes, the genomic interaction sites with multiple interaction loops. The interaction nodes is a binding platform regulates one or multiple genes. The detected interaction nodes will be annotated for downstream validation.

About

Summary

A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data

Last Updated

Dec 29, 2024 at 00:51

License

file LICENSE

Total Downloads

5.0K

Supported Platforms

noarch