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bioconductor-genomicinteractionnodes

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A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-genomicinteractionnodes

Usage Tracking

1.10.0
1.6.0
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1.2.0
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Total downloads: 0

Description

The GenomicInteractionNodes package can import interactions from bedpe file and define the interaction nodes, the genomic interaction sites with multiple interaction loops. The interaction nodes is a binding platform regulates one or multiple genes. The detected interaction nodes will be annotated for downstream validation.

About

Summary

A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data

Information Last Updated

Apr 22, 2025 at 15:29

License

file LICENSE

Total Downloads

4.9K

Platforms

noarch Version: 1.10.0