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bioconductor-genomicfeatures

Community

Query the gene models of a given organism/assembly

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-genomicfeatures

Usage Tracking

1.58.0
1.54.1
1.52.1
1.50.2
1.46.1
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Total downloads: 0

Description

Extract the genomic locations of genes, transcripts, exons, introns, and CDS, for the gene models stored in a TxDb object. A TxDb object is a small database that contains the gene models of a given organism/assembly. Bioconductor provides a small collection of TxDb objects in the form of ready-to-install TxDb packages for the most commonly studied organisms. Additionally, the user can easily make a TxDb object (or package) for the organism/assembly of their choice by using the tools from the txdbmaker package.

About

Summary

Query the gene models of a given organism/assembly

Information Last Updated

Apr 22, 2025 at 15:28

License

Artistic-2.0

Total Downloads

328.8K

Platforms

Linux 64 Version: 1.32.3
macOS 64 Version: 1.32.3
noarch Version: 1.58.0