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bioconda / packages / bioconductor-genomicfeatures 1.58.0

Query the gene models of a given organism/assembly

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.58.0
  • linux-64 v1.32.3
  • osx-64 v1.32.3

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-genomicfeatures
conda install bioconda/label/cf201901::bioconductor-genomicfeatures
conda install bioconda/label/gcc7::bioconductor-genomicfeatures

Description

Extract the genomic locations of genes, transcripts, exons, introns, and CDS, for the gene models stored in a TxDb object. A TxDb object is a small database that contains the gene models of a given organism/assembly. Bioconductor provides a small collection of TxDb objects in the form of ready-to-install TxDb packages for the most commonly studied organisms. Additionally, the user can easily make a TxDb object (or package) for the organism/assembly of their choice by using the tools from the txdbmaker package.


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