Representation and manipulation of short genomic alignments
conda install bioconda::bioconductor-genomicalignmentsconda install bioconda/label/cf201901::bioconductor-genomicalignmentsconda install bioconda/label/gcc7::bioconductor-genomicalignments
Provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.