bioconda / packages / bioconductor-gemini 1.2.0

GEMINI: Variational inference approach to infer genetic interactions from pairwise CRISPR screens

Installers

conda install

  • noarch  v1.2.0
To install this package with conda run:
conda install -c bioconda bioconductor-gemini

Description

GEMINI uses log-fold changes to model sample-dependent and independent effects, and uses a variational Bayes approach to infer these effects. The inferred effects are used to score and identify genetic interactions, such as lethality and recovery. More details can be found in Zamanighomi et al. 2019 (in press).

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