bioconductor-gdnax
Diagnostics for assessing genomic DNA contamination in RNA-seq data
Diagnostics for assessing genomic DNA contamination in RNA-seq data
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Provides diagnostics for assessing genomic DNA contamination in RNA-seq data, as well as plots representing these diagnostics. Moreover, the package can be used to get an insight into the strand library protocol used and, in case of strand-specific libraries, the strandedness of the data. Furthermore, it provides functionality to filter out reads of potential gDNA origin.
Summary
Diagnostics for assessing genomic DNA contamination in RNA-seq data
Last Updated
Jan 3, 2025 at 18:36
License
Artistic-2.0
Total Downloads
1.0K
Supported Platforms