bioconda / packages / bioconductor-findmyfriends 1.20.0

Microbial Comparative Genomics in R

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.20.0
  • osx-64  v1.20.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-findmyfriends
conda install -c bioconda/label/gcc7 bioconductor-findmyfriends
conda install -c bioconda/label/cf201901 bioconductor-findmyfriends

Description

A framework for doing microbial comparative genomics in R. The main purpose of the package is assisting in the creation of pangenome matrices where genes from related organisms are grouped by similarity, as well as the analysis of these data. FindMyFriends provides many novel approaches to doing pangenome analysis and supports a gene grouping algorithm that scales linearly, thus making the creation of huge pangenomes feasible.

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