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bioconductor-fcscan

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fcScan for detecting clusters of coordinates with user defined options

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-fcscan

Usage Tracking

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Description

This package is used to detect combination of genomic coordinates falling within a user defined window size along with user defined overlap between identified neighboring clusters. It can be used for genomic data where the clusters are built on a specific chromosome or specific strand. Clustering can be performed with a "greedy" option allowing thus the presence of additional sites within the allowed window size.

About

Summary

fcScan for detecting clusters of coordinates with user defined options

Last Updated

Dec 31, 2024 at 12:43

License

Artistic-2.0

Total Downloads

18.5K

Supported Platforms

noarch