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bioconda / packages / bioconductor-fcscan 1.16.0

fcScan for detecting clusters of coordinates with user defined options

Installers

  • noarch v1.16.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-fcscan

Description

This package is used to detect combination of genomic coordinates falling within a user defined window size along with user defined overlap between identified neighboring clusters. It can be used for genomic data where the clusters are built on a specific chromosome or specific strand. Clustering can be performed with a "greedy" option allowing thus the presence of additional sites within the allowed window size.


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