bioconductor-enhancerhomologsearch
Identification of putative mammalian orthologs to given enhancer
Identification of putative mammalian orthologs to given enhancer
To install this package, run one of the following:
Get ENCODE data of enhancer region via H3K4me1 peaks and search homolog regions for given sequences. The candidates of enhancer homolog regions can be filtered by distance to target TSS. The top candidates from human and mouse will be aligned to each other and then exported as multiple alignments with given enhancer.
Summary
Identification of putative mammalian orthologs to given enhancer
Last Updated
Jan 3, 2025 at 16:57
License
GPL (>= 2)
Total Downloads
9.9K
Supported Platforms