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bioconda / packages / bioconductor-dialignr 2.10.0

Dynamic Programming Based Alignment of MS2 Chromatograms

Installers

  • osx-64 v2.10.0
  • linux-64 v2.10.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-dialignr

Description

To obtain unbiased proteome coverage from a biological sample, mass-spectrometer is operated in Data Independent Acquisition (DIA) mode. Alignment of these DIA runs establishes consistency and less missing values in complete data-matrix. This package implements dynamic programming with affine gap penalty based approach for pair-wise alignment of analytes. A hybrid approach of global alignment (through MS2 features) and local alignment (with MS2 chromatograms) is implemented in this tool.


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