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bioconda / packages / bioconductor-demuxmix 1.8.0

Demultiplexing oligo-barcoded scRNA-seq data using regression mixture models

Installers

  • noarch v1.8.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-demuxmix

Description

A package for demultiplexing single-cell sequencing experiments of pooled cells labeled with barcode oligonucleotides. The package implements methods to fit regression mixture models for a probabilistic classification of cells, including multiplet detection. Demultiplexing error rates can be estimated, and methods for quality control are provided.


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