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bioconda / packages / bioconductor-decomptumor2sig 2.18.0

Decomposition of individual tumors into mutational signatures by signature refitting

Installers

  • noarch v2.18.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-decomptumor2sig

Description

Uses quadratic programming for signature refitting, i.e., to decompose the mutation catalog from an individual tumor sample into a set of given mutational signatures (either Alexandrov-model signatures or Shiraishi-model signatures), computing weights that reflect the contributions of the signatures to the mutation load of the tumor.


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