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bioconda / packages / bioconductor-curatedtcgadata 1.24.0

Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.24.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-curatedtcgadata
conda install bioconda/label/gcc7::bioconductor-curatedtcgadata

Description

This package provides publicly available data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment objects. MultiAssayExperiment integrates multiple assays (e.g., RNA-seq, copy number, mutation, microRNA, protein, and others) with clinical / pathological data. It also links assay barcodes with patient identifiers, enabling harmonized subsetting of rows (features) and columns (patients / samples) across the entire multi-'omics experiment.


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