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bioconda / packages / bioconductor-cordon 1.20.0

Codon Usage Analysis and Prediction of Gene Expressivity

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.20.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-cordon
conda install bioconda/label/gcc7::bioconductor-cordon

Description

Tool for analysis of codon usage in various unannotated or KEGG/COG annotated DNA sequences. Calculates different measures of CU bias and CU-based predictors of gene expressivity, and performs gene set enrichment analysis for annotated sequences. Implements several methods for visualization of CU and enrichment analysis results.


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