bioconductor-cexor
An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates
An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates
To install this package, run one of the following:
Strand specific peak-pair calling in ChIP-exo replicates. The cumulative Skellam distribution function is used to detect significant normalised count differences of opposed sign at each DNA strand (peak-pairs). Then, irreproducible discovery rate for overlapping peak-pairs across biological replicates is computed.
Summary
An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates
Last Updated
Dec 31, 2024 at 19:14
License
Artistic-2.0 | GPL-2 + file LICENSE
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44.1K
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