bioconda / packages / bioconductor-cemitool 1.18.1

Co-expression Modules identification Tool

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.18.1
To install this package run one of the following:
conda install -c bioconda bioconductor-cemitool
conda install -c "bioconda/label/gcc7" bioconductor-cemitool

Description

The CEMiTool package unifies the discovery and the analysis of coexpression gene modules in a fully automatic manner, while providing a user-friendly html report with high quality graphs. Our tool evaluates if modules contain genes that are over-represented by specific pathways or that are altered in a specific sample group. Additionally, CEMiTool is able to integrate transcriptomic data with interactome information, identifying the potential hubs on each network.


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