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bioconductor-cellbench

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Construct Benchmarks for Single Cell Analysis Methods

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-cellbench

Usage Tracking

1.22.0
1.18.0
1.16.0
1.14.0
1.10.0
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Downloads (Last 6 months): 0

Description

This package contains infrastructure for benchmarking analysis methods and access to single cell mixture benchmarking data. It provides a framework for organising analysis methods and testing combinations of methods in a pipeline without explicitly laying out each combination. It also provides utilities for sampling and filtering SingleCellExperiment objects, constructing lists of functions with varying parameters, and multithreaded evaluation of analysis methods.

About

Summary

Construct Benchmarks for Single Cell Analysis Methods

Last Updated

Jan 3, 2025 at 17:36

License

GPL-3

Total Downloads

20.9K

Supported Platforms

noarch