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bioconductor-celaref

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Single-cell RNAseq cell cluster labelling by reference

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-celaref

Usage Tracking

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Description

After the clustering step of a single-cell RNAseq experiment, this package aims to suggest labels/cell types for the clusters, on the basis of similarity to a reference dataset. It requires a table of read counts per cell per gene, and a list of the cells belonging to each of the clusters, (for both test and reference data).

About

Summary

Single-cell RNAseq cell cluster labelling by reference

Last Updated

Dec 27, 2024 at 06:14

License

GPL-3

Total Downloads

22.1K

Supported Platforms

noarch