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bioconda / packages / bioconductor-celaref 1.20.0

Single-cell RNAseq cell cluster labelling by reference

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.20.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-celaref
conda install bioconda/label/gcc7::bioconductor-celaref

Description

After the clustering step of a single-cell RNAseq experiment, this package aims to suggest labels/cell types for the clusters, on the basis of similarity to a reference dataset. It requires a table of read counts per cell per gene, and a list of the cells belonging to each of the clusters, (for both test and reference data).


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