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bioconda / packages / bioconductor-cand 1.26.0

Perform Chromosomal Ancestry Differences (CAnD) Analyses

Installers

Info: This package contains files in non-standard labels.
  • osx-64 v1.12.0
  • linux-64 v1.12.0
  • noarch v1.26.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-cand
conda install bioconda/label/cf201901::bioconductor-cand
conda install bioconda/label/gcc7::bioconductor-cand

Description

Functions to perform the CAnD test on a set of ancestry proportions. For a particular ancestral subpopulation, a user will supply the estimated ancestry proportion for each sample, and each chromosome or chromosomal segment of interest. A p-value for each chromosome as well as an overall CAnD p-value will be returned for each test. Plotting functions are also available.


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