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bioconda / packages / bioconductor-bsgenome.hsapiens.ucsc.hg18.masked

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Hsapiens.UCSC.hg18, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.4 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r44hdfd78af_13.tar.bz2  22 days and 8 hours ago 27 main
conda 9.3 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r43hdfd78af_12.tar.bz2  1 year and 1 month ago 354 main
conda 9.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r43hdfd78af_11.tar.bz2  1 year and 6 months ago 334 main
conda 8.7 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r42hdfd78af_10.tar.bz2  2 years and 2 months ago 570 main
conda 9.1 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r41hdfd78af_9.tar.bz2  2 years and 4 months ago 205 main
conda 8.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r41hdfd78af_8.tar.bz2  3 years and 2 months ago 611 main
conda 8.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r41hdfd78af_7.tar.bz2  3 years and 7 months ago 283 main
conda 8.0 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r40hdfd78af_6.tar.bz2  3 years and 9 months ago 158 main
conda 7.7 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r40_5.tar.bz2  4 years and 2 months ago 172 main
conda 7.6 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r40_4.tar.bz2  4 years and 8 months ago 184 main
conda 7.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r36_3.tar.bz2  5 years and 2 months ago 208 main
conda 7.0 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r36_2.tar.bz2  5 years and 5 months ago 219 main
conda 6.6 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r351_0.tar.bz2  6 years and 1 month ago 255 main gcc7

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