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bioconda / packages / bioconductor-bsgenome.hsapiens.ucsc.hg18.masked

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Hsapiens.UCSC.hg18, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.3 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r43hdfd78af_12.tar.bz2  8 months and 29 days ago 279 main
conda 9.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r43hdfd78af_11.tar.bz2  1 year and 1 month ago 316 main
conda 8.7 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r42hdfd78af_10.tar.bz2  1 year and 10 months ago 554 main
conda 9.1 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r41hdfd78af_9.tar.bz2  2 years and 6 days ago 186 main
conda 8.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r41hdfd78af_8.tar.bz2  2 years and 10 months ago 593 main
conda 8.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r41hdfd78af_7.tar.bz2  3 years and 3 months ago 263 main
conda 8.0 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r40hdfd78af_6.tar.bz2  3 years and 5 months ago 142 main
conda 7.7 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r40_5.tar.bz2  3 years and 10 months ago 154 main
conda 7.6 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r40_4.tar.bz2  4 years and 4 months ago 167 main
conda 7.2 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r36_3.tar.bz2  4 years and 10 months ago 189 main
conda 7.0 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r36_2.tar.bz2  5 years and 1 month ago 202 main
conda 6.6 kB | noarch/bioconductor-bsgenome.hsapiens.ucsc.hg18.masked-1.3.99-r351_0.tar.bz2  5 years and 8 months ago 237 main gcc7

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