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bioconda / packages / bioconductor-bsgenome.btaurus.ucsc.bostau3.masked

Full genome sequences for Bos taurus (Cow) as provided by UCSC (bosTau3, Aug. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Btaurus.UCSC.bosTau3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

Type Size Name Uploaded Downloads Labels
conda 9.4 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r44hdfd78af_13.tar.bz2  7 months and 30 days ago 248 main
conda 9.3 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_12.tar.bz2  1 year and 8 months ago 839 main
conda 9.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r43hdfd78af_11.tar.bz2  2 years and 1 month ago 407 main
conda 8.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r42hdfd78af_10.tar.bz2  2 years and 9 months ago 632 main
conda 9.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_9.tar.bz2  3 years and 15 days ago 283 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_8.tar.bz2  3 years and 9 months ago 677 main
conda 8.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r41hdfd78af_7.tar.bz2  4 years and 2 months ago 338 main
conda 8.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40hdfd78af_6.tar.bz2  4 years and 4 months ago 216 main
conda 7.7 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_5.tar.bz2  4 years and 9 months ago 231 main
conda 7.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r40_4.tar.bz2  5 years and 3 months ago 245 main
conda 7.2 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_3.tar.bz2  5 years and 9 months ago 259 main
conda 7.0 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r36_2.tar.bz2  6 years and 18 days ago 273 main
conda 6.5 kB | noarch/bioconductor-bsgenome.btaurus.ucsc.bostau3.masked-1.3.99-r351_0.tar.bz2  6 years and 8 months ago 308 main gcc7

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