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bioconda / packages / bioconductor-blase 1.0.0

Bulk Linking Analysis for Single-cell Experiments

Installers

  • noarch v1.0.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-blase

Description

BLASE is a method for finding where bulk RNA-seq data lies on a single-cell pseudotime trajectory. It uses a fast and understandable approach based on Spearman correlation, with bootstrapping to provide confidence. BLASE can be used to "date" bulk RNA-seq data, annotate cell types in scRNA-seq, and help correct for developmental phenotype differences in bulk RNA-seq experiments.


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