bioconda / packages / bioconductor-bayesspace 1.4.1

Clustering and Resolution Enhancement of Spatial Transcriptomes

Installers

conda install

  • linux-64  v1.4.1
  • osx-64  v1.4.1
To install this package with conda run:
conda install -c bioconda bioconductor-bayesspace

Description

Tools for clustering and enhancing the resolution of spatial gene expression experiments. BayesSpace clusters a low-dimensional representation of the gene expression matrix, incorporating a spatial prior to encourage neighboring spots to cluster together. The method can enhance the resolution of the low-dimensional representation into "sub-spots", for which features such as gene expression or cell type composition can be imputed.


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