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bioconda / packages / bioconductor-bader 1.40.0

Bayesian Analysis of Differential Expression in RNA Sequencing Data

Installers

Info: This package contains files in non-standard labels.
  • osx-64 v1.40.0
  • linux-64 v1.40.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-bader
conda install bioconda/label/cf201901::bioconductor-bader
conda install bioconda/label/gcc7::bioconductor-bader

Description

For RNA sequencing count data, BADER fits a Bayesian hierarchical model. The algorithm returns the posterior probability of differential expression for each gene between two groups A and B. The joint posterior distribution of the variables in the model can be returned in the form of posterior samples, which can be used for further down-stream analyses such as gene set enrichment.


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