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bioconda / packages / bioconductor-amplican 1.24.0

Automated analysis of CRISPR experiments

Installers

Info: This package contains files in non-standard labels.
  • linux-aarch64 v1.24.0
  • linux-64 v1.24.0
  • osx-64 v1.24.0
  • noarch v1.4.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-amplican
conda install bioconda/label/gcc7::bioconductor-amplican

Description

amplican performs alignment of the amplicon reads, normalizes gathered data, calculates multiple statistics (e.g. cut rates, frameshifts) and presents results in form of aggregated reports. Data and statistics can be broken down by experiments, barcodes, user defined groups, guides and amplicons allowing for quick identification of potential problems.


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