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bioconductor-amplican

Community

Automated analysis of CRISPR experiments

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-amplican

Usage Tracking

1.28.0
1.24.0
1.22.1
1.20.0
1.16.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

amplican performs alignment of the amplicon reads, normalizes gathered data, calculates multiple statistics (e.g. cut rates, frameshifts) and presents results in form of aggregated reports. Data and statistics can be broken down by experiments, barcodes, user defined groups, guides and amplicons allowing for quick identification of potential problems.

About

Summary

Automated analysis of CRISPR experiments

Last Updated

Dec 22, 2024 at 03:16

License

GPL-3

Total Downloads

31.5K

Supported Platforms

linux-64
macOS-64
linux-aarch64

Unsupported Platforms

noarch Last supported version: 1.4.0