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bioconda / packages / bioconductor-amountain 1.28.0

Active modules for multilayer weighted gene co-expression networks: a continuous optimization approach

Installers

Info: This package contains files in non-standard labels.
  • linux-aarch64 v1.28.0
  • linux-64 v1.28.0
  • osx-64 v1.28.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-amountain
conda install bioconda/label/cf201901::bioconductor-amountain
conda install bioconda/label/gcc7::bioconductor-amountain

Description

A pure data-driven gene network, weighted gene co-expression network (WGCN) could be constructed only from expression profile. Different layers in such networks may represent different time points, multiple conditions or various species. AMOUNTAIN aims to search active modules in multi-layer WGCN using a continuous optimization approach.


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