bioconductor-ahpathbankdbs
Metabolites and proteins linked to PathBank pathways (for AnnotationHub)
Metabolites and proteins linked to PathBank pathways (for AnnotationHub)
To install this package, run one of the following:
The package provides a comprehensive mapping table of metabolites and proteins linked to PathBank pathways. The tables include HMDB, KEGG, ChEBI, CAS, Drugbank, Uniprot IDs. The tables are provided for each of the 10 species ("Homo sapiens", "Escherichia coli", "Mus musculus", "Arabidopsis thaliana", "Saccharomyces cerevisiae", "Bos taurus", "Caenorhabditis elegans", "Rattus norvegicus", "Drosophila melanogaster", and "Pseudomonas aeruginosa"). These table information can be used for Metabolite Set (and other) Enrichment Analysis.
Summary
Metabolites and proteins linked to PathBank pathways (for AnnotationHub)
Information Last Updated
Apr 22, 2025 at 15:29
License
Artistic-2.0
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