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bioconductor-affxparser

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Affymetrix File Parsing SDK

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-affxparser

Usage Tracking

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Description

Package for parsing Affymetrix files (CDF, CEL, CHP, BPMAP, BAR). It provides methods for fast and memory efficient parsing of Affymetrix files using the Affymetrix' Fusion SDK. Both ASCII- and binary-based files are supported. Currently, there are methods for reading chip definition file (CDF) and a cell intensity file (CEL). These files can be read either in full or in part. For example, probe signals from a few probesets can be extracted very quickly from a set of CEL files into a convenient list structure.

About

Summary

Affymetrix File Parsing SDK

Last Updated

Dec 14, 2024 at 14:28

License

LGPL (>= 2)

Total Downloads

60.8K

Supported Platforms

linux-64
macOS-64
linux-aarch64