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bioconda / packages / assemblytics 1.2.1

analyze a genome assembly by comparing it to a reference genome

Installers

  • noarch v1.2.1

conda install

To install this package run one of the following:
conda install bioconda::assemblytics

Description

Assemblytics detects and analyzes variants from a de novo genome assembly aligned to a reference genome. It incorporates a unique anchor filtering approach to increase robustness to repetitive elements and identifies six classes of variants based on their distinct alignment signatures. Assemblytics can be applied both to comparing aberrant genomes, such as human cancers, to a reference, or to identify differences between related species.


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