| Package Name | Access | Summary | Updated |
|---|---|---|---|
| netmd | public | SHORT DESCRIPTION of NETMD HERE!! | 2025-04-18 |
| mutserve | public | Mutserve2 is a variant caller for the mitochondrial genome to detect homoplasmic and heteroplasmic sites in sequence data. | 2025-03-25 |
| mitoscape | public | MitoScape: A tool for mitochondrial DNA analysis using Apache Spark. | 2025-03-25 |
| mity | public | Mity is a bioinformatic analysis pipeline designed to call mitochondrial SNV and INDEL variants from Whole Genome Sequencing (WGS) data. | 2025-03-25 |
| gsnap | public | GMAP, a Genomic Mapping and Alignment Program for mRNA and EST Sequences, and GSNAP, a Genomic Short-read Nucleotide Alignment Program | 2025-03-25 |
| mitosalt | public | MitoSAlt is a pipeline to identify large deletions and duplications in human and mouse mitochondrial genomes from next generation whole genome/exome sequencing data. The pipeline is capable of analyzing any circular genome in principle, as long as a proper configuration file is provided. | 2025-03-25 |
| gzrt | public | Unofficial build of the gzip Recovery Toolkit aka gzrecover | 2025-03-25 |
| fastqwiper | public | An ensemble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and fix reads interleaving | 2025-03-25 |
| pyntacle | public | A Python software package for network analysis based on non-canonical metrics and HPC-Computing | 2025-03-25 |
