metacompass
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public |
MetaCompass: Reference-guided Assembly of Metagenomes.
|
2025-08-06 |
gsl
|
public |
GNU Scientific Library
|
2025-08-04 |
bioemu
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public |
Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning.
|
2025-07-29 |
abinit
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public |
ABINIT is an atomic-scale simulation software suite.
|
2025-07-29 |
pytorch
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public |
Tensors and Dynamic neural networks in Python with strong GPU acceleration
|
2025-07-25 |
openmpi
|
public |
Message Passing Interface
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2025-07-25 |
isonclust3
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public |
De novo clustering of long transcript reads into genes.
|
2025-07-07 |
npinv
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public |
an accurate tool for detecting and genotyping inversion using multiple alignment long reads
|
2025-06-12 |
qupath
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public |
QuPath is open source software for bioimage analysis.
|
2025-05-11 |
hcc-jupyter-kernels
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public |
Jupyter kernelspec files for HCC resources
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2025-04-15 |
julia
|
public |
A high-performance dynamic programming language for data science
|
2025-04-13 |
sequeltools
|
public |
A suite of tools for working with PacBio Sequel raw sequence data.
|
2025-03-26 |
deepmriprep
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public |
Neural network-based preprocessing of MRI data. Prepping brain images in seconds.
|
2025-03-25 |
torchreg
|
public |
Lightweight image registration library using PyTorch
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2025-03-25 |
deepbet
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public |
Fast brain extraction using neural networks
|
2025-03-25 |
fill-voids
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public |
Fill voids in 3D binary images fast.
|
2025-03-25 |
fpocket
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public |
fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation.
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2025-03-25 |
sequencetubemap
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public |
Displays multiple genomic sequences in the form of a tube map.
|
2025-03-25 |
lumpy
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public |
The LumPy toolset provides a proof of concept for lumping for DBMF/PA/AME equations for contact processes on complex networks.
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2025-03-25 |
vcfstats
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public |
Powerful statistics for VCF files
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2025-03-25 |
vcfsort
|
public |
Sorts a VCF file (for human) by chromosome.
|
2025-03-25 |
datar
|
public |
A Grammar of Data Manipulation in python
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2025-03-25 |
simplug
|
public |
A simple plugin system for python with async hooks supported
|
2025-03-25 |
plotnine-prism
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public |
Prism themes for plotnine, inspired by ggprism
|
2025-03-25 |
mumaxplus
|
public |
More versatile and extensible GPU-accelerated micromagnetic simulator.
|
2025-03-25 |