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bidscoin
|
public |
Converts and organises raw MRI data-sets according to the Brain Imaging Data Structure (BIDS).
|
2025-03-25 |
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phys2bids
|
public |
Python library to convert physiological data files into BIDS format.
|
2025-03-25 |
|
bioread
|
public |
Libraries for reading BIOPAC files.
|
2025-03-25 |
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pypet2bids
|
public |
A python implementation of an ECAT to BIDS converter.
|
2025-03-25 |
|
json-maj
|
public |
Updates Jsons w/ json, key pair, or entire dictionary as arguments.
|
2025-03-25 |
|
multiecho
|
public |
Combine multi-echoes from a multi-echo fMRI acquisition.
|
2025-03-25 |
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pydeface
|
public |
A tool to remove facial structure from MRI images.
|
2025-03-25 |
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etelemetry
|
public |
A lightweight python client to communicate with the etelemetry server.
|
2025-03-25 |
|
git
|
public |
distributed version control system
|
2025-03-25 |
|
popoolation2
|
public |
PoPoolation2 allows to compare allele frequencies for SNPs between two or more populations and to identify significant differences.
|
2025-03-25 |
|
t-coffee
|
public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
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2025-03-25 |
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nomad
|
public |
NOMAD is an unsupervised and reference-free unifying framework to discover regulated sequence variation through statistical analysis of k-mer composition in both DNA and RNA sequence.
|
2025-03-25 |
|
blobtoolkit
|
public |
Interactive quality assessment of genome assemblies.
|
2025-03-25 |
|
blobtk
|
public |
Core functionality shared across BlobToolKit tools.
|
2025-03-25 |
|
chromedriver-binary-auto
|
public |
Installer for chromedriver.
|
2025-03-25 |
|
geckodriver-autoinstaller
|
public |
Automatically install geckodriver that supports the currently installed version of chrome.
|
2025-03-25 |
|
python-blobtk
|
public |
Core functionality shared across BlobToolKit tools.
|
2025-03-25 |
|
mgblast
|
public |
fast all-vs-all DNA alignment tool, modification of megablast from a 2006 version of NCBI C Toolkit
|
2025-03-25 |
|
sparta
|
public |
Stochastic PArallel Rarefied-gas Time-accurate Analyzer.
|
2025-03-25 |
|
cgmaptools
|
public |
Command-line Toolset for Bisulfite Sequencing Data Analysis
|
2025-03-25 |
|
tf-comb
|
public |
Transcription Factor Co-Occurrence using Market Basket analysis
|
2025-03-25 |
|
tobias
|
public |
Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal
|
2025-03-25 |
|
ls-bsr
|
public |
Large scale Blast Score Ratio (BSR) analysis.
|
2025-03-25 |
|
crystal
|
public |
The Crystal Programming Language
|
2025-03-25 |
|
shards
|
public |
The Crystal Programming Language
|
2025-03-25 |
|
crystal-compiler
|
public |
The Crystal Programming Language
|
2025-03-25 |
|
crystal-binary
|
public |
The Crystal Programming Language
|
2025-03-25 |
|
php-composer
|
public |
Dependency Manager for PHP
|
2025-03-25 |
|
php
|
public |
PHP is a popular general-purpose scripting language that is especially suited to web development.
|
2025-03-25 |
|
visualkeras
|
public |
Architecture visualization of Keras models
|
2025-03-25 |
|
libspectre
|
public |
libspectre is a small library for rendering Postscript documents.
|
2025-03-25 |
|
ghostscript
|
public |
An interpreter for the PostScript language and for PDF
|
2025-03-25 |
|
jbig2dec
|
public |
A decoder implementation of the JBIG2 image compression format
|
2025-03-25 |
|
libheif
|
public |
libheif is an HEIF and AVIF file format decoder and encoder.
|
2025-03-25 |
|
rav1e
|
public |
The fastest and safest AV1 encoder.
|
2025-03-25 |
|
cargo-c
|
public |
build and install C-compatible libraries
|
2025-03-25 |
|
libde265
|
public |
Open h.265 video codec implementation.
|
2025-03-25 |
|
libvideogfx
|
public |
LibVideoGfx - video processing library.
|
2025-03-25 |
|
r-cdcfluview
|
public |
The 'U.S.' Centers for Disease Control and Prevention (CDC) maintain a portal <https://gis.cdc.gov/grasp/fluview/fluportaldashboard.html> for accessing state, regional and national influenza statistics as well as mortality surveillance data. The web interface makes it difficult and time-consuming to select and retrieve influenza data. Tools are provided to access the data provided by the portal's underlying 'API'.
|
2025-03-25 |
|
r-mmwrweek
|
public |
The first day of any MMWR week is Sunday. MMWR week numbering is sequential beginning with 1 and incrementing with each week to a maximum of 52 or 53. MMWR week #1 of an MMWR year is the first week of the year that has at least four days in the calendar year. This package provides functionality to convert Dates to MMWR day, week, and year and the reverse.
|
2025-03-25 |
|
nextcloud-api-wrapper
|
public |
Python wrapper for NextCloud api
|
2025-03-25 |
|
twincons
|
public |
This projects provides several packages for analysis of MSAs comprised of two sequence groups.
|
2025-03-25 |
|
dssp
|
public |
Application to assign secondary structure to proteins.
|
2025-03-25 |
|
qhull
|
public |
Qhull computes the convex hull
|
2025-03-25 |
|
eman2
|
public |
A scientific image processing software suite with a focus on CryoEM and CryoET.
|
2025-03-25 |
|
ocaml-findlib
|
public |
opam is a source-based package manager for OCaml
|
2025-03-25 |
|
ocaml
|
public |
Objective Caml (OCaml) is an implementation of the ML language.
|
2025-03-25 |
|
gsl
|
public |
GNU Scientific Library
|
2025-03-25 |
|
pydusa
|
public |
Pydusa is a package for parallel programming using Python.
|
2025-03-25 |
|
ifort_linux-64
|
public |
Intel OneAPI classic compilers (icc, icpc, ifort).
|
2025-03-25 |
