CMD + K

scregulate

Community

Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data

Installation

To install this package, run one of the following:

Conda
$conda install zandigohar::scregulate

Usage Tracking

1.0.1
1.0.0
0.1.27
0.1.26
0.1.25
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

scRegulate is a Python toolkit designed for inferring transcription factor activity and clustering single-cell RNA-seq data using variational inference with biological priors. It is built on PyTorch and Scanpy, and supports CUDA acceleration for high-performance inference.

About

Summary

Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data

Last Updated

Sep 17, 2025 at 05:18

License

MIT

Total Downloads

87

Supported Platforms

noarch