scregulate
Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data
Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data
To install this package, run one of the following:
scRegulate is a Python toolkit designed for inferring transcription factor activity and clustering single-cell RNA-seq data using variational inference with biological priors. It is built on PyTorch and Scanpy, and supports CUDA acceleration for high-performance inference.
Summary
Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data
Last Updated
Sep 17, 2025 at 05:18
License
MIT
Total Downloads
87
Supported Platforms
GitHub Repository
https://github.com/YDaiLab/scRegulate