rpetit3
by rpetit3
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To install packages from this channel, use the channel temporarily with conda or add it to your .condarc file for configured ongoing access. Learn more
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| aspera-connect | 3.9.6 | aspera connect high-performance transfer plug-in | Mar 25, 2025 | Proprietary |
| bactopia | 4.0.0 | Bactopia is a flexible pipeline for complete analysis of bacterial genomes. | Apr 22, 2026 | MIT |
| titan-nf | 1.4.2 | A Nextflow wrapper around the Titan GC workflow | Mar 25, 2025 | AGPL-3.0 |
| theiacov-gc | 2.1.2 | Command-line version of the TheiaCov genomic characterization workflow for SARS-CoV-2. | Mar 25, 2025 | AGPL-3.0 |
| medaka | 1.9.1 | Neural network sequence error correction. | Mar 25, 2025 | MPL-2.0 |
| titan-gc | 1.5.3 | Command-line version of the Titan genomic characterization workflow for viral pathogens of concern. | Mar 25, 2025 | AGPL-3.0 |
| artic | 1.3.0 | ARTIC pipeline - a bioinformatics pipeline for working with virus sequencing data sequenced with nanopore | Mar 25, 2025 | MIT |
| pmga | 3.0.1 | Command-line version of PMGA (PubMLST Genome Annotator) for all Neisseria species and Haemophilus influenzae | Mar 25, 2025 | AGPL-2.0 |