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r_test / packages

Package Name Access Summary Updated
r-restimizeapi public Provides the user with functions to develop their trading strategy, uncover actionable trading ideas, and monitor consensus shifts with crowdsourced earnings and economic estimate data directly from <www.estimize.com>. Further information regarding the web services this package invokes can be found at <www.estimize.com/api>. 2023-06-16
r-reportroc public Provides an easy way to report the results of ROC analysis, including: 1. an ROC curve. 2. the value of Cutoff, AUC (Area Under Curve), ACC (accuracy), SEN (sensitivity), SPE (specificity), PLR (positive likelihood ratio), NLR (negative likelihood ratio), PPV (positive predictive value), NPV (negative predictive value). 2023-06-16
r-rel public Derives point estimates with confidence intervals for Bennett et als S, Cohen's kappa, Conger's kappa, Fleiss' kappa, Gwet's AC, intraclass correlation coefficients, Krippendorff's alpha, Scott's pi, the standard error of measurement, and weighted kappa. 2023-06-16
r-regpro public Tools are provided for (1) nonparametric regression (kernel, local linear), (2) semiparametric regression (single index, additive models), and (3) quantile regression (linear, kernel). 2023-06-16
r-rebus.base public Build regular expressions piece by piece using human readable code. This package contains core functionality, and is primarily intended to be used by package developers. 2023-06-16
r-rdroolsjars public External jars required for package 'Rdrools'. 2023-06-16
r-rcssplot public Provides a means to style plots through cascading style sheets. This separates the aesthetics from the data crunching in plots and charts. 2023-06-16
r-rcbalance public Tools for large, sparse optimal matching of treated units and control units in observational studies. Provisions are made for refined covariate balance constraints, which include fine and near-fine balance as special cases. Matches are optimal in the sense that they are computed as solutions to network optimization problems rather than greedy algorithms. 2023-06-16
r-rbitcoin public Utilities related to Bitcoin. Unified markets API interface (bitstamp, kraken, btce, bitmarket). Both public and private API calls. Integration of data structures for all markets. Support SSL. Read Rbitcoin documentation (command: ?btc) for more information. 2023-06-16
r-rbiouml public Functions for connecting to BioUML server, querying BioUML repository and launching BioUML analyses. 2023-06-16
r-rattle.data public Contains the datasets used as default examples by the rattle package. The datasets themselves can be used independently of the rattle package to illustrate analytics, data mining, and data science tasks. 2023-06-16
r-rasciidoc public Inspired by Karl Broman`s reader on using 'knitr' with 'asciidoc' (<http://kbroman.org/knitr_knutshell/pages/asciidoc.html>), this is merely a wrapper to 'knitr' and 'asciidoc'. 2023-06-16
r-random public The true random number service provided by the RANDOM.ORG website created by Mads Haahr samples atmospheric noise via radio tuned to an unused broadcasting frequency together with a skew correction algorithm due to John von Neumann. More background is available in the included vignette based on an essay by Mads Haahr. In its current form, the package offers functions to retrieve random integers, randomized sequences and random strings. 2023-06-16
r-radarboxplot public Creates the radar-boxplot, a plot that was created by the author during his doctoring in forest resources. The radar-boxplot is a visualization feature suited for multivariate classification/clustering. It provides an intuitive deep understanding of the data. 2023-06-16
r-r6ds public Provides reference classes implementing some useful data structures. The package implements these data structures by using the reference class R6. Therefore, the classes of the data structures are also reference classes which means that their instances are passed by reference. The implemented data structures include stack, queue, double-ended queue, doubly linked list, set, dictionary and binary search tree. See for example <https://en.wikipedia.org/wiki/Data_structure> for more information about the data structures. 2023-06-16
r-r2winbugs public Invoke a 'BUGS' model in 'OpenBUGS' or 'WinBUGS', a class "bugs" for 'BUGS' results and functions to work with that class. Function write.model() allows a 'BUGS' model file to be written. The class and auxiliary functions could be used with other MCMC programs, including 'JAGS'. 2023-06-16
r-r2d2 public This package provides generic functions to analyze the distribution of two continuous variables: 'conf2d' to calculate a smooth empirical confidence region, and 'freq2d' to calculate a frequency distribution. 2023-06-16
r-quran public Full text, in data frames containing one row per verse, of the Qur'an in Arabic (with and without vowels) and in English (the Yusuf Ali and Saheeh International translations), formatted to be convenient for text analysis. 2023-06-16
r-quiddich public Provides tools for an automated identification of diagnostic molecular characters, i.e. such columns in a given nucleotide or amino acid alignment that allow to distinguish taxa from each other. These characters can then be used to complement the formal descriptions of the taxa, which are often based on morphological and anatomical features. Especially for morphologically cryptic species, this will be helpful. QUIDDICH distinguishes between four different types of diagnostic characters. For more information, see "Kuehn, A.L., Haase, M. 2019. QUIDDICH: QUick IDentification of DIagnostic CHaracters." 2023-06-16
r-qualci public Exact one-sided p-values and confidence intervals for an outcome variable defined on an interval measurement scale with only qualitative and ordinal information available. 2023-06-16
r-qrcode public Create QRcode in R. 2023-06-16
r-qrage public Tools that create D3 JavaScript force directed graph from R. D3 JavaScript was created by Michael Bostock. See http://d3js.org/ and, more specifically for Force Directed Graph https://github.com/mbostock/d3/wiki/Force-Layout. 2023-06-16
r-psymonitor public Apply the popular real-time monitoring strategy proposed by Phillips, Shi and Yu (2015a,b;PSY) <doi:10.1111/iere.12132>, <doi:10.1111/iere.12131>, along with a new bootstrap procedure designed to mitigate the potential impact of heteroskedasticity and to effect family-wise size control in recursive testing algorithms (Phillips and Shi, forthcoming). 2023-06-16
r-psychtools public Support functions, data sets, and vignettes for the 'psych' package. Contains several of the biggest data sets for the 'psych' package as well as one vignette. A few helper functions for file manipulation are included as well. For more information, see the <https://personality-project.org/r> web page. 2023-06-16
r-protoclass public Greedy algorithm described in Bien and Tibshirani (2011) Prototype Selection for Interpretable Classification. Annals of Applied Statistics. 5(4). 2403-2424 2023-06-16
r-prioritylasso public Fits successive Lasso models for several blocks of (omics) data with different priorities and takes the predicted values as an offset for the next block. 2023-06-16
r-postlogic public Provides adds postfix and infix logic operators for if, then, unless, and otherwise. 2023-06-16
r-poptrend public Functions to estimate and plot smooth or linear population trends, or population indices, from animal or plant count survey data. 2023-06-16
r-popreconstruct public Implements the Bayesian hierarchical model described by Wheldon, Raftery, Clark and Gerland (see: <doi:10.1080/01621459.2012.737729>) for simultaneously estimating age-specific population counts, fertility rates, mortality rates and net international migration flows, at the national level. 2023-06-16
r-poisson.glm.mix public High dimensional mixtures of Poisson Generalized Linear models with three different parameterizations of Poisson means are considered. Moreover, partitioning the response variables into a set of blocks is possible. The package estimates parameters via EM algorithm. For an efficient initialization, a random splitting small-EM is introduced. 2023-06-16
r-pmr public Descriptive statistics (mean rank, pairwise frequencies, and marginal matrix), Analytic Hierarchy Process models (with Saaty's and Koczkodaj's inconsistencies), probability models (Luce models, distance-based models, and rank-ordered logit models) and visualization with multidimensional preference analysis for ranking data are provided. Current, only complete rankings are supported by this package. 2023-06-16
r-plus public Efficient procedures for fitting an entire regression sequences with different model types. 2023-06-16
r-pkgkitten public Provides a function kitten() which creates cute little packages which pass R package checks. This sets it apart from package.skeleton() which it calls, and which leaves imperfect files behind. As this is not exactly helpful for beginners, kitten() offers an alternative. 2023-06-16
r-sadeg public We analyzed the nucleotide composition of genes with a special emphasis on stability of DNA sequences. Besides, in a variety of different organisms unequal use of synonymous codons, or codon usage bias, occurs which also show variation among genes in the same genome. Seemingly, codon usage bias is affected by both selective constraints and mutation bias which allows and enables us to examine and detect changes in these two evolutionary forces between genomes or along one genome. Therefore, we determined the codon adaptation index (CAI), effective number of codons (ENC) and codon usage analysis with calculation of the relative synonymous codon usage (RSCU), and subsequently predicted the translation efficiency and accuracy through GC-rich codon usages. Furthermore, we estimated the relative stability of the DNA sequence following calculation of the average free energy (Delta G) and Dimer base-stacking energy level. 2023-06-16
r-rv public Implements a simulation-based random variable class and a suite of methods for extracting parts of random vectors, calculating extremes of random vectors, and generating random vectors under a variety of distributions following Kerman and Gelman (2007) <doi:10.1007/s11222-007-9020-4>. 2023-06-16
r-rt3 public Play the classic game of tic-tac-toe (naughts and crosses). 2023-06-16
r-rqcc public Constructs robust quality control chart based on the median and Hodges-Lehmann estimators (location) and the median absolute deviation (MAD) and Shamos estimators (scale) which are unbiased with a sample of finite size. For more details, see Park, Kim and Wang (2019)<arXiv:1908.00462>. This work was partially supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (No. NRF-2017R1A2B4004169). 2023-06-16
r-rpublica public Client for accessing data journalism APIs from ProPublica <http://www.propublica.org/>. 2023-06-16
r-rphylip public Rphylip provides an R interface for the PHYLIP package. All users of Rphylip will thus first have to install the PHYLIP phylogeny methods program package (Felsenstein 2013). See http://www.phylip.com for more information about installing PHYLIP. 2023-06-16
r-ropenweathermap public OpenWeatherMap (OWM) <http://openweathermap.org/api> is a service providing weather related data. This package can be used to access current weather data for one location or several locations. It can also be used to forecast weather for 5 days with data for every 3 hours. 2023-06-16
r-robastrda public Includes 'sysdata.rda' file for packages of the 'RobASt' - family of packages; is currently used by package 'RobExtremes' only. 2023-06-16
r-rms.gof public This package can be used to test any simple null hypothesis using the root-mean-square goodness of fit test. Monte Carlo estimation is used to calculate the associated P-value. 2023-06-16
r-rmea public A suite of tools useful to read, visualize and export bivariate motion energy time-series. Lagged synchrony between subjects can be analyzed through windowed cross-correlation. Surrogate data generation allows an estimation of pseudosynchrony that helps to estimate the effect size of the observed synchronization. Ramseyer & Tschacher (2011) <doi:10.1037/a0023419>. 2023-06-16
r-rm2006 public Estimation the conditional covariance matrix using the RiskMetrics 2006 methodology of Zumbach (2007) <doi:10.2139/ssrn.1420185>. 2023-06-16
r-rjstat public Read and write the 'JSON-stat' format (http://json-stat.org) to and from (lists of) R data frames. Not all features are supported, especially the extensive metadata features of 'JSON-stat'. 2023-06-16
r-rimpact public The metrics() function calculates measures of scholarly impact. These include conventional measures, such as the number of publications and the total citations to all publications, as well as modern and robust metrics based on the vector of citations associated with each publication, such as the h index and many of its variants or rivals. These methods are described in Ruscio et al. (2012) <DOI: 10.1080/15366367.2012.711147>. 2023-06-16
r-revgeo public Function revgeo() allows you to use the Photon geocoder for OpenStreetMap <http://photon.komoot.de>, Google Maps <http://maps.google.com>, and Bing <https://www.bingmapsportal.com> to reverse geocode coordinate pairs with minimal hassle. 2023-06-16
r-revealjs public R Markdown format for 'reveal.js' presentations, a framework for easily creating beautiful presentations using HTML. 2023-06-16
r-rethinker public Simple, native 'RethinkDB' client. 2023-06-16
r-restorepoint public Debugging with restore points instead of break points. A restore point stores all local variables when called inside a function. The stored values can later be retrieved and evaluated in a modified R console that replicates the function's environment. To debug step by step, one can simply copy & paste the function body from the R script. Particularly convenient in combination with "RStudio". See the "Github" page inst/vignettes for a tutorial. 2023-06-16

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