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Stochastic Newton Sampler (SNS) is a Metropolis-Hastings-based, Markov Chain Monte Carlo sampler for twice differentiable, log-concave probability density functions (PDFs) where the proposal density function is a multivariate Gaussian resulting from a second-order Taylor-series expansion of log-density around the current point. The mean of the Gaussian proposal is the full Newton-Raphson step from the current point. A Boolean flag allows for switching from SNS to Newton-Raphson optimization (by choosing the mean of proposal function as next point). This can be used during burn-in to get close to the mode of the PDF (which is unique due to concavity). For high-dimensional densities, mixing can be improved via 'state space partitioning' strategy, in which SNS is applied to disjoint subsets of state space, wrapped in a Gibbs cycle. Numerical differentiation is available when analytical expressions for gradient and Hessian are not available. Facilities for validation and numerical differentiation of log-density are provided. Note: Formerly available versions of the MfUSampler can be obtained from the archive <https://cran.r-project.org/src/contrib/Archive/MfUSampler/>.

Type Size Name Uploaded Downloads Labels
conda 554.3 kB | noarch/r-sns-1.2.2-r43h142f84f_0.tar.bz2  1 year and 1 month ago 20 main
conda 553.6 kB | noarch/r-sns-1.1.2-r42h142f84f_0.tar.bz2  2 years and 7 months ago 49 main
conda 553.3 kB | noarch/r-sns-1.1.2-r36h6115d3f_0.tar.bz2  4 years and 11 months ago 123 main

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