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Performs genomic mediation analysis with adaptive confounding adjustment (GMAC) proposed by Yang et al. (2017) <doi:10.1101/078683>. It implements large scale mediation analysis and adaptively selects potential confounding variables to adjust for each mediation test from a pool of candidate confounders. The package is tailored for but not limited to genomic mediation analysis (e.g., cis-gene mediating trans-gene regulation pattern where an eQTL, its cis-linking gene transcript, and its trans-gene transcript play the roles as treatment, mediator and the outcome, respectively), restricting to scenarios with the presence of cis-association (i.e., treatment-mediator association) and random eQTL (i.e., treatment).

Type Size Name Uploaded Downloads Labels
conda 314.4 kB | noarch/r-gmac-3.1-r43h142f84f_0.tar.bz2  1 year and 9 days ago 19 main
conda 313.7 kB | noarch/r-gmac-3.1-r42h142f84f_0.tar.bz2  2 years and 6 months ago 51 main
conda 314.5 kB | noarch/r-gmac-3.0-r36h6115d3f_0.tar.bz2  4 years and 10 months ago 115 main

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