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r / packages / r-adjclust

Implements a constrained version of hierarchical agglomerative clustering, in which each observation is associated to a position, and only adjacent clusters can be merged. Typical application fields in bioinformatics include Genome-Wide Association Studies or Hi-C data analysis, where the similarity between items is a decreasing function of their genomic distance. Taking advantage of this feature, the implemented algorithm is time and memory efficient. This algorithm is described in Chapter 4 of Alia Dehman (2015) <https://hal.archives-ouvertes.fr/tel-01288568v1>.

Type Size Name Uploaded Downloads Labels
conda 1.5 MB | linux-64/r-adjclust-0.5.7-r43h76d94ec_0.tar.bz2  1 year and 1 month ago 29 main
conda 1.5 MB | win-64/r-adjclust-0.5.7-r36hda5aaf8_0.tar.bz2  4 years and 11 months ago 54 main
conda 1.5 MB | osx-64/r-adjclust-0.5.7-r36h46e59ec_0.tar.bz2  4 years and 11 months ago 25 main
conda 1.5 MB | linux-64/r-adjclust-0.5.7-r36h96ca727_0.tar.bz2  4 years and 11 months ago 74 main

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